dash_bio_oncoprint Examples and Reference

using Dash, DashBio
using StringEncodings, HTTP, JSON

external_stylesheets = ["https://codepen.io/chriddyp/pen/bWLwgP.css"]

req = HTTP.request("GET", "https://git.io/oncoprint_dataset3.json")
data = decode(req.body, "UTF-8")

data = JSON.parse(data)

app = dash(external_stylesheets=external_stylesheets)


app.layout = html_div([
    dashbio_oncoprint(
        id="dashbio-default-oncoprint",
        data=data
    ),
    html_div(id="default-oncoprint-output")
])

callback!(app,
    Output("default-oncoprint-output", "children"),
    [Input("dashbio-default-oncoprint", "eventDatum")]
) do event_data
    if event_data isa Nothing || length(event_data) == 0
        return "There are no event data. Hover over or click on a part of the graph to generate event data."
    end
    event_data = JSON.parse(event_data)

    return [
        html_div(
            "$key,$(replace(string(event_data[key]), "<br>" => "\n"))"
            )
        for key in keys(event_data)
    ]

end

run_server(app, "0.0.0.0", debug=true)

using Dash, DashBio
using StringEncodings, HTTP, JSON

req = HTTP.request("GET", "https://git.io/oncoprint_dataset3.json")
data = decode(req.body, "UTF-8")
data = JSON.parse(data)

app = dash()

app.layout = dashbio_oncoprint(
    data=data,
    colorscale=Dict(
        "MISSENSE" =>  "#e763fa",
        "INFRAME" =>  "#E763FA"
    ),
    backgroundcolor="#F3F6FA"
)

run_server(app, "0.0.0.0", debug=true)

using Dash, DashBio
using StringEncodings, HTTP, JSON

req = HTTP.request("GET", "https://git.io/oncoprint_dataset3.json")
data = decode(req.body, "UTF-8")
data = JSON.parse(data)

app = dash()

app.layout = dashbio_oncoprint(
    data=data,
    height=800,
    width=500,
    padding=0.25
)

run_server(app, "0.0.0.0", debug=true)

using Dash, DashBio
using StringEncodings, HTTP, JSON

req = HTTP.request("GET", "https://git.io/oncoprint_dataset3.json")
data = decode(req.body, "UTF-8")
data = JSON.parse(data)

app = dash()

app.layout = dashbio_oncoprint(
    data=data,
    showlegend=false,
    showoverview=false
)

run_server(app, "0.0.0.0", debug=true)

OncoPrint Properties